Package: compareGroups 4.10.2

compareGroups: Descriptive Analysis by Groups

Create data summaries for quality control, extensive reports for exploring data, as well as publication-ready univariate or bivariate tables in several formats (plain text, HTML,LaTeX, PDF, Word or Excel. Create figures to quickly visualise the distribution of your data (boxplots, barplots, normality-plots, etc.). Display statistics (mean, median, frequencies, incidences, etc.). Perform the appropriate tests (t-test, Analysis of variance, Kruskal-Wallis, Fisher, log-rank, ...) depending on the nature of the described variable (normal, non-normal or qualitative). Summarize genetic data (Single Nucleotide Polymorphisms) data displaying Allele Frequencies and performing Hardy-Weinberg Equilibrium tests among other typical statistics and tests for these kind of data.

Authors:Isaac Subirana [aut, cre], Joan Salvador [ctb]

compareGroups_4.10.2.tar.gz
compareGroups_4.10.2.zip(r-4.7)compareGroups_4.10.2.zip(r-4.6)compareGroups_4.10.2.zip(r-4.5)
compareGroups_4.10.2.tgz(r-4.6-any)compareGroups_4.10.2.tgz(r-4.5-any)
compareGroups_4.10.2.tar.gz(r-4.7-any)compareGroups_4.10.2.tar.gz(r-4.6-any)
compareGroups_4.10.2.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION |NEWS
card.svg |card.png
compareGroups/json (API)

# Install 'compareGroups' in R:

install.packages('compareGroups', repos = c('https://isubirana.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/isubirana/comparegroups/issues

Pkgdown/docs site:https://isubirana.github.io

Datasets:

regicor - REGICOR cross-sectional data
SNPs - SNPs in a case-control study

On CRAN:

comparegroups descriptive-statistics plot report table

9.40 score 42 stars 1 packages 445 scripts 2.2k downloads 20 mentions 30 exports 154 dependencies

Last updated from:fd38b08fc7. Checks:9 OK. Indexed: yes.

Target	Result	Time
linux-devel-x86_64	OK	249
source / vignettes	OK	292
linux-release-x86_64	OK	263
macos-release-arm64	OK	163
macos-oldrel-arm64	OK	213
windows-devel	OK	231
windows-release	OK	235
windows-oldrel	OK	245
wasm-release	OK	189

Exports:cGroupsGUI cGroupsWUI compareGroups compareSNPs createTable descrTable export2csv export2html export2latex export2latex.cbind.createTable export2latex.createTable export2md export2pdf export2word export2xls getResults missingTable padjustCompareGroups print.compareSNPs print.createTable print.summary.compareGroups print.summary.createTable printTable radiograph report strataTable summary.compareGroups summary.createTable varinfo varinfo.compareGroups

Dependencies:abind askpass backports base64enc bit bit64 bookdown boot broom bslib BWStest cachem car carData chron cli clipr codetools colorspace corrplot cowplot cpp11 crayon data.table Deriv digest doBy dplyr evaluate farver fastmap flextable fontawesome fontBitstreamVera fontLiberation fontquiver forcats foreach forecast Formula fracdiff fs future future.apply gdtools generics ggplot2 glmnet globals glue gmp gtable HardyWeinberg haven highr hms htmltools isoband iterators jomo jquerylib jsonlite kableExtra knitr kSamples labeling lattice lifecycle listenv lme4 lmtest magrittr MASS Matrix MatrixModels memoise mgcv mice mime minqa mitml modelr multcompView mvtnorm nlme nloptr nnet numDeriv officer openssl ordinal pan parallelly pbkrtest pillar pkgconfig PMCMRplus prettyunits progress purrr quantreg R6 ragg rappdirs rbibutils RColorBrewer Rcpp RcppArmadillo RcppEigen Rdpack readr reformulas rlang rmarkdown rmdformats Rmpfr rpart Rsolnp rstatix rstudioapi S7 sass scales shape SparseM stringi stringr SuppDists survival svglite sys systemfonts textshaping tibble tidyr tidyselect timeDate tinytex truncnorm tzdb ucminf urca utf8 uuid vctrs viridisLite vroom withr writexl xfun xml2 yaml zip zoo

compareGroups 4.0: Descriptives by groups

Rendered fromcompareGroups_vignette.Rmdusingknitr::rmarkdown

Last update: 2025-08-07
Started: 2018-01-24

Help page	Topics
Descriptive analysis by groups	compareGroups-package
Graphical user interface based on tcltk tools	cGroupsGUI
Web User Interface based on Shiny tools.	cGroupsWUI
Descriptives by groups	compareGroups plot.compareGroups print.compareGroups print.summary.compareGroups summary.compareGroups update.compareGroups
Summarise genetic data by groups.	compareSNPs print.compareSNPs
Table of descriptives by groups: bivariate table	createTable plot.createTable print.createTable print.summary.createTable summary.createTable
Perform descriptives and build the bivariate table.	descrTable
Exporting descriptives table to plain text (CSV) format	export2csv
Exporting descriptives table to HTML format	export2html
Exporting descriptives table to LaTeX format	export2latex export2latex.cbind.createTable export2latex.createTable
Exporting descriptives table to Markdown format	export2md
Exports tables to PDF files.	export2pdf
Exports tables to Word files.	export2word
Exporting descriptives table to Exel format (.xlsx or .xls)	export2xls
Easily retrieve summary data as R-objects (matrices and vectors).	getResults
Table of missingness counts by groups.	missingTable
Update p values according multiple comparisons	padjustCompareGroups
'Nice' table format.	printTable
Lists the values in the data set.	radiograph
REGICOR cross-sectional data	regicor
Report of descriptive tables and plots.	report
SNPs in a case-control study	SNPs
Stratify descriptive table in stratas.	strataTable
Variable names and labels extraction	varinfo varinfo.compareGroups varinfo.createTable

Package: compareGroups 4.10.2

compareGroups: Descriptive Analysis by Groups

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Help Manual

Usage by other packages (reverse dependencies)